Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aspartate-semialdehyde dehydrogenase | SAMN05421827_11332 | Not Available | - | 3801563 - 3802552 | 36272.1 |
| tat (twin-arginine translocation) pathway signal sequence | SAMN05421827_11333 | Not Available | - | 3802781 - 3803650 | 32147.3 |
| tat (twin-arginine translocation) pathway signal sequence | SAMN05421827_11334 | Not Available | - | 3803662 - 3804537 | 32303.0 |
| hydroxypyruvate isomerase | SAMN05421827_11335 | Not Available | - | 3804546 - 3805436 | 33074.8 |
| nucleoside transporter | SAMN05421827_11336 | Not Available | - | 3805438 - 3806676 | 45181.2 |
| protein of unknown function | SAMN05421827_11337 | Not Available | - | 3806897 - 3807577 | 25260.0 |
| hypothetical protein | SAMN05421827_11338 | Not Available | - | 3807636 - 3809093 | 54309.6 |
| cytochrome c | SAMN05421827_11339 | Not Available | - | 3809126 - 3809512 | 13928.3 |
| sugar phosphate isomerase/epimerase | SAMN05421827_11340 | Not Available | - | 3809535 - 3810593 | 39698.6 |
| predicted dehydrogenase | SAMN05421827_11341 | Not Available | - | 3810601 - 3811734 | 41043.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.