Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| enolase | SAMN05421827_11321 | Not Available | - | 3792895 - 3794190 | 46277.6 |
| hypothetical protein | SAMN05421827_11322 | Not Available | - | 3794326 - 3794496 | 6184.66 |
| hypothetical protein | SAMN05421827_11324 | Not Available | - | 3794721 - 3794864 | 5272.22 |
| protein of unknown function | SAMN05421827_11325 | Not Available | - | 3795464 - 3796348 | 32643.5 |
| protein n-acetyltransferase, rimj/riml family | SAMN05421827_11326 | Not Available | - | 3796384 - 3796893 | 19525.5 |
| abc-2 type transport system atp-binding protein | SAMN05421827_11327 | Not Available | + | 3797035 - 3797601 | 21026.1 |
| hypothetical protein | SAMN05421827_11328 | Not Available | + | 3797601 - 3798731 | 43954.4 |
| hypothetical protein | SAMN05421827_11329 | Not Available | - | 3799013 - 3799372 | 13490.6 |
| d-alanyl-d-alanine carboxypeptidase / d-alanyl-d-alanine-endopeptidase (penicillin-binding protein 4) | SAMN05421827_11330 | Not Available | - | 3799388 - 3800797 | 51429.5 |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | SAMN05421827_11331 | Not Available | - | 3800903 - 3801505 | 22846.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.