Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized membrane protein yqik, contains band7/phb/spfh domain | SAMN05421827_11310 | Not Available | + | 3781653 - 3783620 | 71625.5 |
| n-carbamoylputrescine amidase | SAMN05421827_11312 | Not Available | + | 3784039 - 3784914 | 32984.9 |
| four helix bundle protein | SAMN05421827_11313 | Not Available | + | 3785062 - 3785415 | 13453.4 |
| agmatine deiminase | SAMN05421827_11314 | Not Available | + | 3785649 - 3786725 | 40503.8 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN05421827_11315 | Not Available | + | 3786824 - 3787567 | 26387.9 |
| l,d-transpeptidase catalytic domain | SAMN05421827_11316 | Not Available | - | 3787713 - 3788447 | 27984.7 |
| hypothetical protein | SAMN05421827_11317 | Not Available | + | 3788698 - 3790782 | 77463.4 |
| transposase is200 like | SAMN05421827_11318 | Not Available | + | 3790933 - 3791481 | 21891.2 |
| uncharacterized membrane protein yeih | SAMN05421827_11319 | Not Available | - | 3791664 - 3792278 | 22559.3 |
| septum formation initiator | SAMN05421827_11320 | Not Available | - | 3792378 - 3792677 | 12177.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.