Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-asp | Not Available | Not Available | + | 3769945 - 3770021 | Not Available |
| 23s rrna (adenine1618-n6)-methyltransferase | SAMN05421827_1131 | Not Available | + | 3770813 - 3771781 | 36756.8 |
| predicted fe2+/mn2+ transporter, vit1/ccc1 family | SAMN05421827_1132 | Not Available | - | 3772155 - 3772706 | 19593.7 |
| cupin domain-containing protein | SAMN05421827_1133 | Not Available | - | 3772775 - 3773197 | 15327.4 |
| succinyl-coa synthetase alpha subunit | SAMN05421827_1134 | Not Available | + | 3774346 - 3775218 | 29928.6 |
| peptide-methionine (r)-s-oxide reductase/peptide methionine sulfoxide reductase msra/msrb | SAMN05421827_1135 | Not Available | + | 3775704 - 3776198 | 18187.7 |
| rare lipoprotein a | SAMN05421827_1136 | Not Available | + | 3776343 - 3776723 | 14236.3 |
| ribonucleoside-diphosphate reductase beta chain | SAMN05421827_1137 | Not Available | + | 3777127 - 3778146 | 39252.0 |
| ribonucleoside-diphosphate reductase alpha chain | SAMN05421827_1138 | Not Available | + | 3778322 - 3780706 | 89408.6 |
| cysteine-rich cwc | SAMN05421827_1139 | Not Available | + | 3780904 - 3781125 | 8329.94 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.