Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ferredoxin, 2fe-2s | SAMN05421827_112157 | Not Available | - | 3756618 - 3756944 | 11860.2 |
| thioredoxin reductase (nadph) | SAMN05421827_112158 | Not Available | - | 3756981 - 3757991 | 36906.7 |
| hypothetical protein | SAMN05421827_112159 | Not Available | - | 3758150 - 3758680 | 20590.7 |
| prolyl oligopeptidase | SAMN05421827_112160 | Not Available | - | 3758692 - 3760818 | 79266.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421827_112161 | Not Available | + | 3761109 - 3764330 | 118982.0 |
| susd family protein | SAMN05421827_112162 | Not Available | + | 3764349 - 3765887 | 56956.1 |
| udp-2,3-diacylglucosamine hydrolase | SAMN05421827_112163 | Not Available | + | 3766173 - 3766922 | 29191.0 |
| peptide chain release factor 1 | SAMN05421827_112165 | Not Available | + | 3767603 - 3768676 | 40150.9 |
| Trna-asp | Not Available | Not Available | + | 3768779 - 3768855 | Not Available |
| putative peptide modification target, tigr04139 family | SAMN05421827_112167 | Not Available | + | 3769316 - 3769528 | 7935.56 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.