Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked outer membrane protein, susc/raga family | SAMN05421827_112146 | Not Available | + | 3740901 - 3743945 | 109555.0 |
| starch-binding associating with outer membrane | SAMN05421827_112147 | Not Available | + | 3743957 - 3745552 | 58937.6 |
| outer membrane protein beta-barrel domain-containing protein | SAMN05421827_112148 | Not Available | - | 3745731 - 3746333 | 21681.9 |
| hypothetical protein | SAMN05421827_112149 | Not Available | + | 3746582 - 3746797 | 8383.15 |
| phospholipase/carboxylesterase | SAMN05421827_112150 | Not Available | + | 3746871 - 3747722 | 32511.8 |
| hypothetical protein | SAMN05421827_112151 | Not Available | - | 3747750 - 3747884 | 5064.19 |
| carboxyl-terminal processing protease | SAMN05421827_112152 | Not Available | + | 3747915 - 3749606 | 61998.4 |
| alpha-l-fucosidase | SAMN05421827_112153 | Not Available | + | 3749632 - 3750957 | 50476.4 |
| alpha-1,2-mannosidase, putative | SAMN05421827_112154 | Not Available | + | 3751258 - 3753516 | 83562.4 |
| glycosyl hydrolases family 2, tim barrel domain | SAMN05421827_112155 | Not Available | + | 3753615 - 3756221 | 98566.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.