Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| laci family transcriptional regulator | SAMN05421827_112136 | Not Available | - | 3723396 - 3724433 | 37916.9 |
| predicted acyltransferase | SAMN05421827_112137 | Not Available | - | 3724473 - 3725657 | 43992.8 |
| glucosamine-6-phosphate deaminase | SAMN05421827_112138 | Not Available | - | 3726286 - 3728211 | 72492.4 |
| anhydro-n-acetylmuramic acid kinase | SAMN05421827_112139 | Not Available | + | 3728362 - 3729558 | 43341.1 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421827_112140 | Not Available | + | 3729662 - 3732796 | 113052.0 |
| susd family protein | SAMN05421827_112141 | Not Available | + | 3732871 - 3734109 | 44377.0 |
| dna-binding transcriptional regulator of sugar metabolism, deor/glpr family | SAMN05421827_112142 | Not Available | - | 3734144 - 3734890 | 27613.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421827_112143 | Not Available | + | 3735125 - 3738205 | 112181.0 |
| starch-binding associating with outer membrane | SAMN05421827_112144 | Not Available | + | 3738214 - 3739824 | 59849.1 |
| protein of unknown function | SAMN05421827_112145 | Not Available | + | 3739849 - 3740646 | 29013.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.