Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| two-component system, ompr family, phosphate regulon sensor histidine kinase phor | SAMN05421827_112126 | Not Available | + | 3710289 - 3712109 | 69157.7 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN05421827_112127 | Not Available | + | 3712225 - 3712956 | 28015.2 |
| 1,4-dihydroxy-6-naphthoate synthase | SAMN05421827_112128 | Not Available | - | 3713065 - 3713913 | 31596.1 |
| futalosine hydrolase | SAMN05421827_112129 | Not Available | - | 3714032 - 3714655 | 22672.1 |
| 6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase | SAMN05421827_112130 | Not Available | + | 3714761 - 3715171 | 15813.7 |
| gtp cyclohydrolase i | SAMN05421827_112131 | Not Available | + | 3715184 - 3715819 | 23900.9 |
| [acyl-carrier-protein] s-malonyltransferase | SAMN05421827_112132 | Not Available | + | 3715901 - 3716782 | 30933.4 |
| hamp domain-containing protein | SAMN05421827_112133 | Not Available | + | 3716870 - 3720601 | 141893.0 |
| hypothetical protein | SAMN05421827_112134 | Not Available | - | 3720644 - 3721546 | 34226.9 |
| uncharacterized lipoprotein yddw, upf0748 family | SAMN05421827_112135 | Not Available | + | 3721752 - 3723296 | 58862.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.