Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pkd repeat-containing protein | SAMN05421827_112116 | Not Available | - | 3695598 - 3701519 | 207825.0 |
| chaperonin groel | SAMN05421827_112117 | Not Available | - | 3701851 - 3703485 | 57517.2 |
| chaperonin groes | SAMN05421827_112118 | Not Available | - | 3703619 - 3703909 | 10216.1 |
| probable dna metabolism protein | SAMN05421827_112119 | Not Available | - | 3704293 - 3705057 | 29792.6 |
| putative dna modification/repair radical sam protein | SAMN05421827_112120 | Not Available | - | 3705232 - 3706488 | 47757.1 |
| uncharacterized protein | SAMN05421827_112121 | Not Available | - | 3706590 - 3707234 | 24147.8 |
| helix-turn-helix | SAMN05421827_112122 | Not Available | - | 3707304 - 3707585 | 10592.8 |
| hypothetical protein | SAMN05421827_112123 | Not Available | - | 3707867 - 3708361 | 19287.0 |
| putative n6-adenine-specific dna methylase | SAMN05421827_112124 | Not Available | - | 3708427 - 3709608 | 44044.2 |
| protein of unknown function | SAMN05421827_112125 | Not Available | + | 3709677 - 3710042 | 13443.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.