Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| preprotein translocase subunit secg | SAMN05421827_11295 | Not Available | + | 3676724 - 3677086 | 12166.0 |
| two-component system, ompr family, phosphate regulon sensor histidine kinase phor | SAMN05421827_11296 | Not Available | + | 3677219 - 3678244 | 39021.5 |
| hypothetical protein | SAMN05421827_11297 | Not Available | + | 3678628 - 3679269 | 24359.2 |
| inorganic phosphate transporter, pit family | SAMN05421827_11298 | Not Available | + | 3679282 - 3680292 | 35680.4 |
| carboxypepd_reg-like domain-containing protein | SAMN05421827_11299 | Not Available | - | 3680994 - 3682298 | 47027.3 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421827_112100 | Not Available | - | 3682291 - 3682869 | 22397.8 |
| protein of unknown function | SAMN05421827_112101 | Not Available | + | 3683075 - 3683836 | 27517.6 |
| wd40-like beta propeller repeat | SAMN05421827_112102 | Not Available | + | 3684024 - 3684959 | 33805.1 |
| rna polymerase sigma factor, sigma-70 family | SAMN05421827_112104 | Not Available | + | 3685496 - 3686047 | 21658.3 |
| hypothetical protein | SAMN05421827_112105 | Not Available | + | 3686058 - 3686405 | 13495.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.