Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| two-component system, chemotaxis family, response regulator cheb | SAMN05421827_11285 | Not Available | + | 3665426 - 3666010 | 21211.6 |
| two-component system, cell cycle response regulator divk | SAMN05421827_11286 | Not Available | + | 3666003 - 3666395 | 14491.2 |
| protein of unknown function | SAMN05421827_11287 | Not Available | - | 3666514 - 3667470 | 36119.6 |
| lema protein | SAMN05421827_11288 | Not Available | - | 3667470 - 3668027 | 20689.0 |
| hypothetical protein | SAMN05421827_11289 | Not Available | - | 3668078 - 3669892 | 69471.6 |
| hypothetical protein | SAMN05421827_11290 | Not Available | - | 3669959 - 3671743 | 67010.7 |
| pp_03172 | SAMN05421827_11291 | Not Available | + | 3672266 - 3673681 | Not Available |
| regulatory protein, fis family | SAMN05421827_11292 | Not Available | + | 3673750 - 3674997 | 46533.5 |
| lipopolysaccharide-assembly | SAMN05421827_11293 | Not Available | + | 3675064 - 3675579 | 18865.7 |
| hypothetical protein | SAMN05421827_11294 | Not Available | + | 3675655 - 3676710 | 40130.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.