Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cubico group peptidase, beta-lactamase class c family | SAMN05421827_11275 | Not Available | + | 3653425 - 3654525 | 40861.7 |
| 1,4-dihydroxy-2-naphthoyl-coa hydrolase | SAMN05421827_11276 | Not Available | - | 3654568 - 3654990 | 15465.9 |
| dinb superfamily protein | SAMN05421827_11277 | Not Available | - | 3654980 - 3655489 | 19606.3 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN05421827_11278 | Not Available | - | 3655470 - 3656678 | 46672.3 |
| glutamyl-trna synthetase | SAMN05421827_11279 | Not Available | + | 3656816 - 3658324 | 56639.8 |
| hypothetical protein | SAMN05421827_11280 | Not Available | + | 3658553 - 3659395 | 30445.6 |
| his kinase a (phospho-acceptor) domain-containing protein | SAMN05421827_11281 | Not Available | + | 3659497 - 3660630 | 42860.0 |
| signal transduction histidine kinase | SAMN05421827_11282 | Not Available | + | 3660650 - 3664234 | 133602.0 |
| response regulator receiver domain-containing protein | SAMN05421827_11283 | Not Available | + | 3664248 - 3664619 | 13438.7 |
| chemotaxis protein methyltransferase cher | SAMN05421827_11284 | Not Available | + | 3664623 - 3665441 | 31988.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.