Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05421827_11265 | Not Available | + | 3644720 - 3647236 | 93930.7 |
| predicted protein | SAMN05421827_11266 | Not Available | + | 3647573 - 3648448 | 32581.3 |
| hypothetical protein | SAMN05421827_11267 | Not Available | + | 3648522 - 3649448 | 35189.3 |
| cold shock protein (beta-ribbon, cspa family) | SAMN05421827_11268 | Not Available | + | 3649553 - 3649744 | 6928.29 |
| hypothetical protein | SAMN05421827_11269 | Not Available | + | 3649826 - 3650353 | 19703.2 |
| hypothetical protein | SAMN05421827_11270 | Not Available | - | 3650444 - 3650923 | 18466.5 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421827_11271 | Not Available | - | 3650920 - 3651501 | 22401.0 |
| quaternary ammonium compound-resistance protein suge | SAMN05421827_11272 | Not Available | - | 3651903 - 3652223 | 11720.7 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05421827_11273 | Not Available | - | 3652293 - 3652859 | 21576.8 |
| hypothetical protein | SAMN05421827_11274 | Not Available | + | 3653050 - 3653412 | 12837.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.