Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421827_11255 | Not Available | - | 3634305 - 3635528 | 46627.3 |
| response regulator receiver domain-containing protein | SAMN05421827_11256 | Not Available | + | 3635619 - 3637193 | 61523.8 |
| hypothetical protein | SAMN05421827_11257 | Not Available | + | 3637379 - 3637600 | 8198.09 |
| trna threonylcarbamoyladenosine biosynthesis protein tsae | SAMN05421827_11258 | Not Available | + | 3637805 - 3638221 | 15747.7 |
| alanine dehydrogenase | SAMN05421827_11259 | Not Available | + | 3638296 - 3639522 | 44557.3 |
| d-alanyl-d-alanine dipeptidase | SAMN05421827_11260 | Not Available | + | 3639595 - 3640281 | 26216.0 |
| histidine phosphatase superfamily (branch 1) | SAMN05421827_11261 | Not Available | - | 3640424 - 3640924 | 18702.6 |
| 7-keto-8-aminopelargonate synthetase | SAMN05421827_11262 | Not Available | - | 3640962 - 3642002 | 38336.9 |
| d-alanyl-d-alanine carboxypeptidase / d-alanyl-d-alanine-endopeptidase (penicillin-binding protein 4) | SAMN05421827_11263 | Not Available | - | 3642002 - 3643330 | 50354.5 |
| aspartyl protease | SAMN05421827_11264 | Not Available | + | 3643382 - 3644629 | 46908.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.