Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| formiminoglutamase | SAMN05421827_11244 | Not Available | + | 3625819 - 3626784 | 35090.8 |
| hypothetical protein | SAMN05421827_11245 | Not Available | - | 3626938 - 3627096 | 6154.37 |
| 5-formyltetrahydrofolate cyclo-ligase | SAMN05421827_11246 | Not Available | - | 3627107 - 3627667 | 21740.7 |
| elongation factor p | SAMN05421827_11248 | Not Available | - | 3628008 - 3628568 | 20988.8 |
| elongation factor p | SAMN05421827_11249 | Not Available | - | 3628699 - 3629259 | 21239.2 |
| abc-type multidrug transport system, atpase component | SAMN05421827_11250 | Not Available | - | 3629739 - 3630365 | 23458.2 |
| acetyltransferase (gnat) family protein | SAMN05421827_11251 | Not Available | - | 3630379 - 3630846 | 17460.1 |
| acyl-[acyl-carrier-protein]--udp-n- acetylglucosamine o-acyltransferase | SAMN05421827_11252 | Not Available | - | 3630919 - 3631704 | 28576.5 |
| udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase | SAMN05421827_11253 | Not Available | - | 3631704 - 3633116 | 52264.4 |
| udp-3-o-[3-hydroxymyristoyl] glucosamine n-acyltransferase | SAMN05421827_11254 | Not Available | - | 3633106 - 3634182 | 38609.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.