Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter, dha2 family, multidrug resistance protein | SAMN05421827_11224 | Not Available | + | 3605028 - 3606575 | 56190.8 |
| phosphoenolpyruvate carboxylase | SAMN05421827_11225 | Not Available | + | 3606838 - 3609423 | 97671.1 |
| hypothetical protein | SAMN05421827_11226 | Not Available | - | 3610123 - 3610371 | 8994.81 |
| thioredoxin | SAMN05421827_11227 | Not Available | - | 3610371 - 3610679 | 11490.8 |
| peroxiredoxin (alkyl hydroperoxide reductase subunit c) | SAMN05421827_11228 | Not Available | - | 3610694 - 3611326 | 23470.5 |
| dipeptidyl aminopeptidase/acylaminoacyl peptidase | SAMN05421827_11229 | Not Available | - | 3611658 - 3614042 | 90163.2 |
| hypothetical protein | SAMN05421827_11230 | Not Available | - | 3614206 - 3615390 | 44765.9 |
| dinb superfamily protein | SAMN05421827_11231 | Not Available | + | 3615651 - 3616133 | 18869.5 |
| hypothetical protein | SAMN05421827_11232 | Not Available | + | 3616130 - 3616606 | 18413.2 |
| heavy-metal-associated domain-containing protein | SAMN05421827_11233 | Not Available | - | 3616796 - 3617515 | 26395.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.