Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette, subfamily f, uup | SAMN05421827_11213 | Not Available | - | 3589663 - 3591525 | 70806.2 |
| rrna maturation rnase ybey | SAMN05421827_11214 | Not Available | - | 3592187 - 3592624 | 16905.3 |
| hypothetical protein | SAMN05421827_11215 | Not Available | - | 3592885 - 3596202 | 127062.0 |
| glycerophosphoryl diester phosphodiesterase family protein | SAMN05421827_11217 | Not Available | + | 3596690 - 3598213 | 58103.2 |
| phospholipase c | SAMN05421827_11218 | Not Available | + | 3598345 - 3600714 | 88619.3 |
| protein of unknown function | SAMN05421827_11219 | Not Available | - | 3600915 - 3601484 | 21092.5 |
| hypothetical protein | SAMN05421827_11220 | Not Available | - | 3601613 - 3601798 | 6677.23 |
| dna-binding transcriptional regulator, acrr family | SAMN05421827_11221 | Not Available | + | 3602031 - 3602657 | 23596.0 |
| outer membrane protein tolc | SAMN05421827_11222 | Not Available | + | 3602678 - 3603973 | 47480.9 |
| membrane fusion protein, multidrug efflux system | SAMN05421827_11223 | Not Available | + | 3603982 - 3605019 | 37108.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.