Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421827_1123 | Not Available | + | 3576528 - 3576866 | 13232.2 |
| formyltetrahydrofolate deformylase | SAMN05421827_1124 | Not Available | - | 3577100 - 3577960 | 32479.5 |
| dna recombination protein rmuc | SAMN05421827_1125 | Not Available | + | 3578058 - 3579443 | 52616.9 |
| thiamine-monophosphate kinase | SAMN05421827_1126 | Not Available | - | 3579670 - 3580710 | 38244.8 |
| na+/h+-dicarboxylate symporter | SAMN05421827_1127 | Not Available | - | 3580785 - 3582029 | 44497.6 |
| quinolinate synthase | SAMN05421827_1128 | Not Available | - | 3582137 - 3583189 | 39290.5 |
| l-aspartate oxidase | SAMN05421827_1129 | Not Available | + | 3583586 - 3585172 | 59761.3 |
| carbonic anhydrase or acetyltransferase, isoleucine patch superfamily | SAMN05421827_11210 | Not Available | + | 3585289 - 3585801 | 18457.3 |
| ig-like domain-containing protein | SAMN05421827_11211 | Not Available | - | 3585893 - 3587536 | 62341.9 |
| trna uridine 5-carboxymethylaminomethyl modification enzyme | SAMN05421827_11212 | Not Available | - | 3587658 - 3589520 | 69034.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.