Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alpha-glucosidase | SAMN05421827_111190 | Not Available | + | 3551736 - 3553703 | 74540.0 |
| alpha-glucosidase | SAMN05421827_111191 | Not Available | + | 3553870 - 3555741 | 69676.3 |
| hypothetical protein | SAMN05421827_111192 | Not Available | - | 3556074 - 3556484 | 15129.0 |
| 2-polyprenyl-6-methoxyphenol hydroxylase | SAMN05421827_111193 | Not Available | - | 3556488 - 3557660 | 43206.9 |
| arac-type dna-binding protein | SAMN05421827_111194 | Not Available | + | 3557748 - 3558719 | 37568.9 |
| hnh endonuclease | SAMN05421827_111195 | Not Available | - | 3559302 - 3560369 | 41416.7 |
| ion channel | SAMN05421827_111196 | Not Available | - | 3560469 - 3561272 | 30711.9 |
| dna mismatch endonuclease, patch repair protein | SAMN05421827_111197 | Not Available | + | 3561688 - 3562191 | 19513.7 |
| dna (cytosine-5)-methyltransferase 1 | SAMN05421827_111198 | Not Available | - | 3562465 - 3563574 | 41821.5 |
| dna (cytosine-5)-methyltransferase 1 | SAMN05421827_111199 | Not Available | - | 3563574 - 3564782 | 46590.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.