Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421827_111160 | Not Available | - | 3522338 - 3522523 | 7362.15 |
| atp-grasp peptide maturase, grasp-with-spasm system | SAMN05421827_111161 | Not Available | - | 3522530 - 3523435 | 35537.6 |
| hypothetical protein | SAMN05421827_111162 | Not Available | - | 3523511 - 3523738 | 8043.48 |
| helix-turn-helix | SAMN05421827_111163 | Not Available | + | 3523926 - 3524321 | 15261.4 |
| hypothetical protein | SAMN05421827_111164 | Not Available | - | 3525041 - 3526132 | 39337.8 |
| iron complex outermembrane recepter protein | SAMN05421827_111165 | Not Available | + | 3526195 - 3528666 | 91339.2 |
| killing trait domain-containing protein | SAMN05421827_111166 | Not Available | - | 3529011 - 3529274 | 9304.59 |
| glycosyl hydrolase family 76 | SAMN05421827_111167 | Not Available | - | 3529970 - 3531172 | 44638.2 |
| protein of unknown function | SAMN05421827_111168 | Not Available | + | 3531694 - 3531852 | 5911.07 |
| bifunctional non-homologous end joining protein ligd | SAMN05421827_111169 | Not Available | + | 3531868 - 3534771 | 109884.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.