Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein ybjt, contains nad(p)-binding and duf2867 domains | SAMN05421827_111150 | Not Available | + | 3510669 - 3511649 | 35756.4 |
| hypothetical protein | SAMN05421827_111151 | Not Available | + | 3511691 - 3512098 | 15350.4 |
| helix-turn-helix domain-containing protein | SAMN05421827_111152 | Not Available | + | 3512130 - 3513050 | 35319.5 |
| helix-turn-helix domain-containing protein | SAMN05421827_111153 | Not Available | - | 3513482 - 3514393 | 34814.7 |
| predicted ester cyclase | SAMN05421827_111154 | Not Available | - | 3514463 - 3514918 | 17167.7 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05421827_111155 | Not Available | - | 3514926 - 3515690 | 27281.8 |
| endonuclease g | SAMN05421827_111156 | Not Available | - | 3516238 - 3517671 | 50639.0 |
| tetratricopeptide repeat-containing protein | SAMN05421827_111157 | Not Available | + | 3517882 - 3519885 | 74584.8 |
| hypothetical protein | SAMN05421827_111158 | Not Available | + | 3520546 - 3521199 | 25589.2 |
| spasm domain peptide maturase, grasp-with-spasm system | SAMN05421827_111159 | Not Available | - | 3521262 - 3522341 | 42258.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.