Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fused signal recognition particle receptor | SAMN05421827_111140 | Not Available | - | 3499680 - 3500642 | 34974.2 |
| hypothetical protein | SAMN05421827_111141 | Not Available | - | 3500781 - 3500882 | 3890.71 |
| protein of unknown function | SAMN05421827_111142 | Not Available | - | 3501000 - 3501155 | 5550.86 |
| large subunit ribosomal protein l33 | SAMN05421827_111143 | Not Available | - | 3501241 - 3501423 | 7012.72 |
| large subunit ribosomal protein l28 | SAMN05421827_111144 | Not Available | - | 3501468 - 3501701 | 8816.89 |
| acetyl-coa synthetase | SAMN05421827_111145 | Not Available | + | 3501995 - 3503890 | 70444.1 |
| susd family protein | SAMN05421827_111146 | Not Available | - | 3503961 - 3505328 | 50491.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421827_111147 | Not Available | - | 3505341 - 3508349 | 109412.0 |
| uncharacterized conserved protein yjbj, upf0337 family | SAMN05421827_111148 | Not Available | + | 3508549 - 3508734 | 7069.36 |
| predicted glycosyl hydrolase, gh43/duf377 family | SAMN05421827_111149 | Not Available | + | 3508800 - 3509849 | 38662.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.