Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| beta-glucosidase | SAMN05421827_111130 | Not Available | + | 3484175 - 3485512 | 50676.4 |
| putative signal transducing protein | SAMN05421827_111131 | Not Available | + | 3485567 - 3486004 | 16021.8 |
| aconitate hydratase | SAMN05421827_111132 | Not Available | - | 3486264 - 3488543 | 81769.0 |
| aconitate hydratase 2 / 2-methylisocitrate dehydratase | SAMN05421827_111133 | Not Available | - | 3488734 - 3491499 | 100593.0 |
| peptidoglycan/xylan/chitin deacetylase, pgda/cda1 family | SAMN05421827_111134 | Not Available | - | 3491872 - 3492540 | 25610.7 |
| outer membrane protein | SAMN05421827_111135 | Not Available | + | 3492560 - 3493960 | 51683.1 |
| hlyd family secretion protein | SAMN05421827_111136 | Not Available | + | 3494067 - 3495404 | 47778.0 |
| glycerol-3-phosphate dehydrogenase (nad(p)+) | SAMN05421827_111137 | Not Available | + | 3495621 - 3496619 | 37052.9 |
| hypothetical protein | SAMN05421827_111138 | Not Available | + | 3497339 - 3497680 | 11933.8 |
| ribosomal protein s12 methylthiotransferase | SAMN05421827_111139 | Not Available | - | 3497852 - 3499180 | 50294.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.