Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| carboxypepd_reg-like domain-containing protein | SAMN05421827_111120 | Not Available | + | 3472422 - 3473579 | 44429.3 |
| tetraacyldisaccharide 4'-kinase | SAMN05421827_111121 | Not Available | + | 3473941 - 3475002 | 40501.2 |
| purine-nucleoside phosphorylase | SAMN05421827_111122 | Not Available | + | 3474974 - 3475789 | 30023.7 |
| putative porin | SAMN05421827_111123 | Not Available | + | 3475791 - 3477797 | 76856.5 |
| outer membrane protein beta-barrel domain-containing protein | SAMN05421827_111124 | Not Available | - | 3477876 - 3478583 | 24385.5 |
| hypothetical protein | SAMN05421827_111125 | Not Available | - | 3478863 - 3480044 | 44649.8 |
| peptidyl-prolyl cis-trans isomerase b (cyclophilin b) | SAMN05421827_111126 | Not Available | + | 3480280 - 3480741 | 16814.8 |
| hypothetical protein | SAMN05421827_111127 | Not Available | + | 3480893 - 3481432 | 19240.2 |
| 23s rrna (pseudouridine1915-n3)-methyltransferase | SAMN05421827_111128 | Not Available | - | 3481697 - 3482170 | 18107.1 |
| muts domain v | SAMN05421827_111129 | Not Available | + | 3482279 - 3484096 | 68813.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.