Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| regulatory protein, luxr family | SAMN05421827_111110 | Not Available | + | 3462305 - 3463066 | 29000.9 |
| 1-pyrroline-5-carboxylate dehydrogenase | SAMN05421827_111111 | Not Available | - | 3463165 - 3464799 | 60177.8 |
| 4'-phosphopantetheinyl transferase superfamily protein | SAMN05421827_111112 | Not Available | - | 3465206 - 3465661 | 17204.6 |
| acyl carrier protein | SAMN05421827_111113 | Not Available | - | 3465648 - 3465911 | 9735.55 |
| 3-oxoacyl-(acyl-carrier-protein) synthase | SAMN05421827_111114 | Not Available | - | 3465904 - 3467181 | 44937.6 |
| 3-hydroxyacyl-[acyl-carrier-protein] dehydratase | SAMN05421827_111115 | Not Available | - | 3467174 - 3467620 | 16397.0 |
| predicted naringenin-chalcone synthase | SAMN05421827_111116 | Not Available | - | 3467646 - 3468698 | 39137.6 |
| methyltransferase domain-containing protein | SAMN05421827_111117 | Not Available | - | 3468695 - 3469408 | 26908.6 |
| dehydrogenase (flavoprotein) | SAMN05421827_111118 | Not Available | - | 3469408 - 3470538 | 42385.4 |
| lathosterol oxidase | SAMN05421827_111119 | Not Available | - | 3470939 - 3472078 | 43881.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.