Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative aminopeptidase frvx | SAMN05421827_111100 | Not Available | - | 3452582 - 3453697 | 41660.8 |
| acetyltransferase (gnat) domain-containing protein | SAMN05421827_111101 | Not Available | - | 3453789 - 3454196 | 15854.2 |
| hypothetical protein | SAMN05421827_111102 | Not Available | - | 3454200 - 3454802 | 22708.4 |
| predicted arabinose efflux permease, mfs family | SAMN05421827_111103 | Not Available | - | 3454817 - 3455983 | 42709.7 |
| propionyl-coa carboxylase beta chain | SAMN05421827_111104 | Not Available | - | 3456110 - 3457657 | 56284.4 |
| hypothetical protein | SAMN05421827_111105 | Not Available | + | 3458281 - 3458583 | 11444.8 |
| carbonic anhydrase/sulfate permease, sulp family | SAMN05421827_111106 | Not Available | + | 3458734 - 3460341 | 57666.0 |
| carbonic anhydrase | SAMN05421827_111107 | Not Available | + | 3460344 - 3461000 | 24197.8 |
| protein of unknown function | SAMN05421827_111108 | Not Available | - | 3461233 - 3461955 | 28052.8 |
| hypothetical protein | SAMN05421827_111109 | Not Available | - | 3461958 - 3462215 | 9564.35 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.