Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| predicted dehydrogenase | SAMN05421827_11190 | Not Available | + | 3445160 - 3446299 | 42416.4 |
| pas fold-containing protein | SAMN05421827_11191 | Not Available | + | 3446632 - 3447708 | 40918.9 |
| dna-binding response regulator, narl/fixj family, contains rec and hth domains | SAMN05421827_11192 | Not Available | + | 3447749 - 3448399 | 24281.6 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421827_11193 | Not Available | + | 3448524 - 3449042 | 19937.0 |
| two-component system, ompr family, alkaline phosphatase synthesis response regulator phop | SAMN05421827_11194 | Not Available | + | 3449118 - 3449489 | 14021.0 |
| hypothetical protein | SAMN05421827_11195 | Not Available | - | 3449641 - 3450117 | 18619.4 |
| dna-directed rna polymerase specialized sigma subunit, sigma24 family | SAMN05421827_11196 | Not Available | - | 3450125 - 3450583 | 17558.2 |
| exodeoxyribonuclease-3 | SAMN05421827_11197 | Not Available | + | 3450667 - 3451506 | 32043.3 |
| pas domain s-box-containing protein | SAMN05421827_11198 | Not Available | - | 3451507 - 3451917 | 15475.4 |
| hypothetical protein | SAMN05421827_11199 | Not Available | - | 3452322 - 3452582 | 10000.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.