Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| methyltransferase domain-containing protein | SAMN05421827_11180 | Not Available | + | 3432685 - 3433905 | 45861.6 |
| l,d-transpeptidase catalytic domain | SAMN05421827_11181 | Not Available | - | 3434071 - 3434643 | 21463.5 |
| putative membrane protein | SAMN05421827_11182 | Not Available | - | 3434714 - 3435073 | 13130.7 |
| molecular chaperone dnak | SAMN05421827_11183 | Not Available | + | 3435562 - 3437472 | 68253.6 |
| hypothetical protein | SAMN05421827_11184 | Not Available | + | 3437887 - 3438015 | 4953.99 |
| nucleotidyl transferase | SAMN05421827_11185 | Not Available | - | 3438167 - 3439066 | 34017.5 |
| hypothetical protein | SAMN05421827_11186 | Not Available | - | 3439179 - 3440753 | 56728.5 |
| merr hth family regulatory protein | SAMN05421827_11187 | Not Available | - | 3440854 - 3441153 | 11653.0 |
| curved dna-binding protein | SAMN05421827_11188 | Not Available | - | 3441159 - 3442055 | 33707.6 |
| prolyl oligopeptidase family protein | SAMN05421827_11189 | Not Available | - | 3442355 - 3444772 | 89670.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.