Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| methionyl aminopeptidase | SAMN05421827_11170 | Not Available | + | 3424575 - 3425303 | 26292.6 |
| translation initiation factor if-1 | SAMN05421827_11171 | Not Available | + | 3425375 - 3425593 | 8322.27 |
| small subunit ribosomal protein s13 | SAMN05421827_11172 | Not Available | + | 3425782 - 3426159 | 14180.4 |
| small subunit ribosomal protein s11 | SAMN05421827_11173 | Not Available | + | 3426308 - 3426697 | 13786.8 |
| small subunit ribosomal protein s4 | SAMN05421827_11174 | Not Available | + | 3426759 - 3427367 | 22892.5 |
| dna-directed rna polymerase subunit alpha | SAMN05421827_11175 | Not Available | + | 3427453 - 3428445 | 37138.9 |
| large subunit ribosomal protein l17 | SAMN05421827_11176 | Not Available | + | 3428542 - 3429066 | 19389.2 |
| hypothetical protein | SAMN05421827_11177 | Not Available | + | 3429152 - 3430006 | 32019.3 |
| gluconate 2-dehydrogenase subunit 3 | SAMN05421827_11178 | Not Available | - | 3430034 - 3430666 | 23491.1 |
| choline dehydrogenase | SAMN05421827_11179 | Not Available | - | 3430677 - 3432413 | 63735.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.