Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ssu ribosomal protein s12p | SAMN05421827_11130 | Not Available | + | 3400449 - 3400862 | 15037.5 |
| small subunit ribosomal protein s7 | SAMN05421827_11131 | Not Available | + | 3400880 - 3401347 | 17592.6 |
| elongation factor g | SAMN05421827_11132 | Not Available | + | 3401477 - 3403591 | 77799.1 |
| ssu ribosomal protein s10p | SAMN05421827_11133 | Not Available | + | 3403726 - 3404031 | 11418.2 |
| hypothetical protein | SAMN05421827_11134 | Not Available | + | 3404131 - 3404376 | 8894.76 |
| hypothetical protein | SAMN05421827_11135 | Not Available | + | 3404500 - 3404775 | 10101.2 |
| hypothetical protein | SAMN05421827_11136 | Not Available | - | 3405153 - 3405515 | 12954.3 |
| dgtpase | SAMN05421827_11137 | Not Available | + | 3405679 - 3407022 | 50717.4 |
| hypothetical protein | SAMN05421827_11138 | Not Available | - | 3407163 - 3407774 | 22982.8 |
| prephenate dehydrogenase (nadp+) | SAMN05421827_11139 | Not Available | + | 3407944 - 3409200 | 47372.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.