Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, spx/mgsr family | SAMN05421827_11120 | Not Available | + | 3392986 - 3393333 | 13335.0 |
| carboxypepd_reg-like domain-containing protein | SAMN05421827_11121 | Not Available | + | 3393402 - 3394142 | 27849.5 |
| hypothetical protein | SAMN05421827_11122 | Not Available | + | 3394308 - 3396341 | 76329.6 |
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN05421827_11123 | Not Available | + | 3396539 - 3396946 | 14585.6 |
| methyltransferase domain-containing protein | SAMN05421827_11124 | Not Available | + | 3397234 - 3397842 | 23022.3 |
| uncharacterized conserved protein | SAMN05421827_11125 | Not Available | + | 3397866 - 3398087 | 8616.41 |
| hypothetical protein | SAMN05421827_11126 | Not Available | + | 3398092 - 3398196 | 4084.1 |
| hypothetical protein | SAMN05421827_11127 | Not Available | + | 3398274 - 3398444 | 6136.75 |
| mrna interferase higb | SAMN05421827_11128 | Not Available | + | 3399302 - 3399613 | 12094.6 |
| hth-type transcriptional regulator / antitoxin higa | SAMN05421827_11129 | Not Available | + | 3399597 - 3399956 | 13558.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.