Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421827_1119 | Not Available | - | 3375494 - 3376336 | 31785.9 |
| isopenicillin n synthase | SAMN05421827_11110 | Not Available | - | 3376436 - 3377398 | 36021.7 |
| peptide-methionine (s)-s-oxide reductase | SAMN05421827_11111 | Not Available | + | 3377668 - 3378267 | 22461.1 |
| hypothetical protein | SAMN05421827_11112 | Not Available | - | 3378564 - 3379865 | 49910.2 |
| malate dehydrogenase (quinone) | SAMN05421827_11113 | Not Available | + | 3380250 - 3381767 | 56216.6 |
| bacillithiol system protein ytxj | SAMN05421827_11115 | Not Available | - | 3382269 - 3382601 | 12406.7 |
| 6,7-dimethyl-8-ribityllumazine synthase | SAMN05421827_11116 | Not Available | - | 3382918 - 3383409 | 17174.5 |
| carboxypepd_reg-like domain-containing protein | SAMN05421827_11117 | Not Available | + | 3383573 - 3389968 | 241704.0 |
| dna-binding response regulator, lytr/algr family | SAMN05421827_11118 | Not Available | - | 3390197 - 3390871 | 25319.0 |
| histidine kinase | SAMN05421827_11119 | Not Available | - | 3391068 - 3392606 | 59327.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.