Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protein n-acetyltransferase, rimj/riml family | SAMN05421827_110147 | Not Available | - | 3363508 - 3364116 | 23591.1 |
| hypothetical protein | SAMN05421827_110148 | Not Available | + | 3364783 - 3365148 | 14115.8 |
| hypothetical protein | SAMN05421827_110149 | Not Available | + | 3365177 - 3365415 | 9042.81 |
| hypothetical protein | SAMN05421827_1111 | Not Available | + | 3365416 - 3365537 | 4553.49 |
| metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family | SAMN05421827_1112 | Not Available | - | 3366758 - 3367870 | 42084.3 |
| membrane associated serine protease, rhomboid family | SAMN05421827_1113 | Not Available | - | 3367870 - 3368724 | 31846.5 |
| rhomboid-like protein | SAMN05421827_1114 | Not Available | - | 3368717 - 3369448 | 27274.7 |
| dna mismatch repair protein mutl | SAMN05421827_1115 | Not Available | - | 3369556 - 3371391 | 68439.7 |
| hypothetical protein | SAMN05421827_1117 | Not Available | + | 3371983 - 3373617 | 60751.9 |
| cubico group peptidase, beta-lactamase class c family | SAMN05421827_1118 | Not Available | + | 3373604 - 3375421 | 67102.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.