Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolases family 16 | SAMN05421827_110137 | Not Available | - | 3343709 - 3344572 | 33047.2 |
| alginate lyase | SAMN05421827_110138 | Not Available | - | 3344583 - 3345695 | 42708.0 |
| signal transduction histidine kinase | SAMN05421827_110139 | Not Available | - | 3345761 - 3349843 | 155399.0 |
| glycosyl hydrolase family 88 | SAMN05421827_110140 | Not Available | - | 3350280 - 3351470 | 45623.4 |
| beta-glucuronidase | SAMN05421827_110141 | Not Available | - | 3351467 - 3353257 | 68807.1 |
| alpha-glucosidase | SAMN05421827_110142 | Not Available | - | 3353271 - 3355262 | 75632.4 |
| melibiase | SAMN05421827_110143 | Not Available | - | 3355266 - 3357440 | 82544.7 |
| iron complex outermembrane recepter protein | SAMN05421827_110144 | Not Available | + | 3357821 - 3360310 | 90920.1 |
| uncharacterized iron-regulated membrane protein | SAMN05421827_110145 | Not Available | + | 3360338 - 3361612 | 48196.8 |
| tricorn protease c1 domain-containing protein | SAMN05421827_110146 | Not Available | - | 3361950 - 3363392 | 54753.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.