Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trna(arg) a34 adenosine deaminase tada | SAMN05421827_110117 | Not Available | + | 3312732 - 3313205 | 17126.5 |
| alpha-amylase | SAMN05421827_110118 | Not Available | - | 3313406 - 3314896 | 56732.8 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421827_110119 | Not Available | + | 3315276 - 3315884 | 23876.2 |
| protein of unknown function | SAMN05421827_110120 | Not Available | + | 3315977 - 3317152 | 43752.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421827_110121 | Not Available | + | 3317591 - 3321139 | 130239.0 |
| susd family protein | SAMN05421827_110122 | Not Available | + | 3321150 - 3322520 | 50604.0 |
| protein of unknown function | SAMN05421827_110123 | Not Available | + | 3322538 - 3323506 | 34467.1 |
| cytochrome oxidase cu insertion factor, sco1/senc/prrc family | SAMN05421827_110124 | Not Available | + | 3323537 - 3324673 | 42197.1 |
| peroxiredoxin | SAMN05421827_110125 | Not Available | + | 3324714 - 3325832 | 41481.2 |
| short-chain dehydrogenase | SAMN05421827_110126 | Not Available | + | 3326190 - 3327170 | 34745.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.