Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| signal transduction histidine kinase | SAMN05421827_110107 | Not Available | + | 3295009 - 3298203 | 121068.0 |
| helix-turn-helix domain-containing protein | SAMN05421827_110108 | Not Available | + | 3298208 - 3298996 | 30131.6 |
| predicted dehydrogenase | SAMN05421827_110109 | Not Available | - | 3299257 - 3300615 | 50752.3 |
| protein of unknown function | SAMN05421827_110110 | Not Available | - | 3300622 - 3301359 | 27662.2 |
| beta-xylosidase | SAMN05421827_110111 | Not Available | + | 3301886 - 3303616 | 64831.7 |
| protein of unknown function | SAMN05421827_110112 | Not Available | - | 3303749 - 3304720 | 37752.8 |
| starch-binding associating with outer membrane | SAMN05421827_110113 | Not Available | - | 3304767 - 3306854 | 78573.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421827_110114 | Not Available | - | 3306858 - 3309905 | 113436.0 |
| ipt/tig domain-containing protein | SAMN05421827_110115 | Not Available | - | 3309960 - 3311318 | 51182.2 |
| hypothetical protein | SAMN05421827_110116 | Not Available | - | 3312233 - 3312589 | 13793.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.