Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421827_11097 | Not Available | - | 3277831 - 3278325 | 19154.9 |
| protein imua | SAMN05421827_11098 | Not Available | + | 3278545 - 3279273 | 26585.6 |
| protein imub | SAMN05421827_11099 | Not Available | + | 3279273 - 3280730 | 55111.4 |
| error-prone dna polymerase | SAMN05421827_110100 | Not Available | + | 3280781 - 3284008 | 121478.0 |
| alpha-1,2-mannosidase, putative | SAMN05421827_110101 | Not Available | + | 3284293 - 3286566 | 85581.5 |
| rhamnogalacturonyl hydrolase yesr | SAMN05421827_110102 | Not Available | - | 3286724 - 3287830 | 43049.0 |
| hypothetical protein | SAMN05421827_110103 | Not Available | - | 3287860 - 3288183 | 12318.0 |
| starch-binding associating with outer membrane | SAMN05421827_110104 | Not Available | - | 3288220 - 3289893 | 62228.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421827_110105 | Not Available | - | 3289904 - 3292969 | 112641.0 |
| beta-xylosidase, gh43 family | SAMN05421827_110106 | Not Available | - | 3293178 - 3294749 | 56987.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.