Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lrp/asnc family transcriptional regulator, leucine-responsive regulatory protein | SAMN05421827_11087 | Not Available | - | 3267825 - 3268292 | 17699.6 |
| hypothetical protein | SAMN05421827_11088 | Not Available | + | 3269013 - 3269606 | 21667.5 |
| atp-binding cassette, subfamily f, member 3 | SAMN05421827_11089 | Not Available | - | 3269986 - 3271620 | 62014.6 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05421827_11090 | Not Available | + | 3271837 - 3272853 | 36655.7 |
| arac-type dna-binding protein | SAMN05421827_11091 | Not Available | + | 3273081 - 3273893 | 31908.8 |
| hypothetical protein | SAMN05421827_11092 | Not Available | - | 3273995 - 3275059 | 41156.5 |
| hypothetical protein | SAMN05421827_11093 | Not Available | - | 3275071 - 3275295 | 8654.94 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05421827_11094 | Not Available | - | 3275358 - 3276131 | 27213.9 |
| hxlr-like helix-turn-helix | SAMN05421827_11095 | Not Available | + | 3276245 - 3276487 | 9478.88 |
| alkylated dna repair dioxygenase alkb | SAMN05421827_11096 | Not Available | - | 3277211 - 3277852 | 24151.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.