Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421827_11077 | Not Available | + | 3255778 - 3256395 | 23196.9 |
| sugar phosphate isomerase/epimerase | SAMN05421827_11078 | Not Available | - | 3256438 - 3257316 | 32338.4 |
| conserved hypothetical integral membrane protein | SAMN05421827_11079 | Not Available | - | 3257629 - 3258999 | 48777.8 |
| hlyd family secretion protein | SAMN05421827_11080 | Not Available | + | 3259294 - 3260541 | 45918.7 |
| outer membrane protein tolc | SAMN05421827_11081 | Not Available | + | 3260546 - 3262006 | 55570.9 |
| putative abc transport system atp-binding protein | SAMN05421827_11082 | Not Available | + | 3262033 - 3262713 | 25204.6 |
| putative abc transport system permease protein | SAMN05421827_11083 | Not Available | + | 3262707 - 3263939 | 46581.2 |
| putative abc transport system permease protein | SAMN05421827_11084 | Not Available | + | 3263959 - 3265140 | 44541.3 |
| dna-binding transcriptional response regulator, ntrc family, contains rec, aaa-type atpase, and a fis-type dna-binding domains | SAMN05421827_11085 | Not Available | + | 3265161 - 3266534 | 51358.7 |
| hamp domain-containing protein | SAMN05421827_11086 | Not Available | + | 3266476 - 3267783 | 50352.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.