Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| chey chemotaxis protein or a chey-like rec (receiver) domain | SAMN05421827_11067 | Not Available | - | 3240101 - 3240481 | 14290.0 |
| 3',5'-cyclic amp phosphodiesterase cpda | SAMN05421827_11068 | Not Available | - | 3240686 - 3241588 | 34406.5 |
| alkaline phosphatase | SAMN05421827_11069 | Not Available | - | 3241699 - 3243564 | 68654.8 |
| starch-binding associating with outer membrane | SAMN05421827_11070 | Not Available | - | 3243558 - 3245081 | 56654.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421827_11071 | Not Available | - | 3245093 - 3248437 | 120858.0 |
| ferric-dicitrate binding protein ferr, regulates iron transport through sigma-19 | SAMN05421827_11072 | Not Available | - | 3248560 - 3249504 | 34693.1 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05421827_11073 | Not Available | - | 3249568 - 3250083 | 19124.4 |
| luciferase family oxidoreductase, group 1 | SAMN05421827_11074 | Not Available | - | 3251419 - 3252423 | 36724.8 |
| dna-binding response regulator, lytr/algr family | SAMN05421827_11075 | Not Available | + | 3252858 - 3253583 | 27890.8 |
| histidine kinase | SAMN05421827_11076 | Not Available | + | 3253845 - 3254954 | 42167.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.