Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| arac-type dna-binding protein | SAMN05421827_11057 | Not Available | - | 3223902 - 3224804 | 33668.4 |
| d-amino-acid dehydrogenase | SAMN05421827_11058 | Not Available | - | 3225239 - 3226480 | 45354.4 |
| 4-hydroxyproline epimerase | SAMN05421827_11059 | Not Available | - | 3226520 - 3227521 | 36729.1 |
| nadp-dependent aldehyde dehydrogenase | SAMN05421827_11060 | Not Available | - | 3227514 - 3229100 | 56186.5 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN05421827_11061 | Not Available | - | 3229115 - 3230032 | 33387.6 |
| peptidase family m1 | SAMN05421827_11062 | Not Available | - | 3230353 - 3232023 | 63751.7 |
| xaa-pro aminopeptidase | SAMN05421827_11063 | Not Available | - | 3232552 - 3233949 | 52260.8 |
| hypothetical protein | SAMN05421827_11064 | Not Available | - | 3234369 - 3237152 | 103800.0 |
| xaa-pro aminopeptidase | SAMN05421827_11065 | Not Available | - | 3237669 - 3239444 | 65776.1 |
| hypothetical protein | SAMN05421827_11066 | Not Available | - | 3239625 - 3240092 | 18101.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
