Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| beta-galactosidase | SAMN05421827_11047 | Not Available | - | 3203249 - 3205090 | 69038.3 |
| o-glycosyl hydrolase | SAMN05421827_11048 | Not Available | - | 3205220 - 3206743 | 56935.4 |
| starch-binding associating with outer membrane | SAMN05421827_11049 | Not Available | - | 3206765 - 3208465 | 62833.2 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421827_11050 | Not Available | - | 3208471 - 3211653 | 115619.0 |
| two component regulator propeller | SAMN05421827_11051 | Not Available | - | 3211880 - 3216007 | 156556.0 |
| nipsnap protein | SAMN05421827_11052 | Not Available | - | 3216755 - 3217540 | 30155.3 |
| hypothetical protein | SAMN05421827_11053 | Not Available | - | 3217564 - 3218055 | 19001.3 |
| dipeptidyl aminopeptidase/acylaminoacyl peptidase | SAMN05421827_11054 | Not Available | - | 3218185 - 3220479 | 86768.7 |
| basic amino acid/polyamine antiporter, apa family | SAMN05421827_11055 | Not Available | - | 3220556 - 3222004 | 52486.5 |
| protein of unknown function | SAMN05421827_11056 | Not Available | - | 3222037 - 3223815 | 68489.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
