Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| beta-galactosidase | SAMN05421827_10984 | Not Available | + | 3031126 - 3033591 | 93754.7 |
| alginate lyase | SAMN05421827_10985 | Not Available | + | 3033607 - 3034794 | 44851.1 |
| rhamnogalacturonyl hydrolase yesr | SAMN05421827_10986 | Not Available | + | 3034796 - 3035968 | 44175.5 |
| glucosylceramidase | SAMN05421827_10987 | Not Available | + | 3036166 - 3037605 | 53969.0 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05421827_10988 | Not Available | + | 3037624 - 3038448 | 28852.9 |
| mannonate dehydratase | SAMN05421827_10989 | Not Available | + | 3038508 - 3039674 | 43449.0 |
| hypothetical protein | SAMN05421827_10990 | Not Available | + | 3040383 - 3040616 | 8846.18 |
| regulator of ribonuclease activity b | SAMN05421827_10991 | Not Available | + | 3041414 - 3041782 | 14069.3 |
| hypothetical protein | SAMN05421827_10992 | Not Available | + | 3042498 - 3043496 | 37595.8 |
| hypothetical protein | SAMN05421827_10993 | Not Available | + | 3043493 - 3043630 | 5049.25 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
