Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| predicted arabinose efflux permease, mfs family | SAMN05421827_10974 | Not Available | + | 3012580 - 3013809 | 44852.1 |
| dna-binding transcriptional regulator, laci/purr family | SAMN05421827_10975 | Not Available | - | 3013934 - 3014968 | 38966.0 |
| hypothetical protein | SAMN05421827_10976 | Not Available | - | 3014994 - 3015131 | 5308.72 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421827_10977 | Not Available | + | 3015412 - 3018597 | 116666.0 |
| starch-binding associating with outer membrane | SAMN05421827_10978 | Not Available | + | 3018690 - 3020429 | 64586.8 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05421827_10979 | Not Available | + | 3020466 - 3023540 | 111379.0 |
| starch-binding associating with outer membrane | SAMN05421827_10980 | Not Available | + | 3023552 - 3025279 | 64143.8 |
| beta-glucuronidase | SAMN05421827_10981 | Not Available | + | 3025382 - 3027211 | 70219.2 |
| endo-1,4-beta-xylanase | SAMN05421827_10982 | Not Available | + | 3027213 - 3028295 | 40250.7 |
| beta-galactosidase | SAMN05421827_10983 | Not Available | + | 3028478 - 3031120 | 99467.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
