Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421827_10954 | Not Available | + | 2984150 - 2984347 | 7541.3 |
| pas fold-containing protein | SAMN05421827_10955 | Not Available | + | 2984945 - 2986090 | 42720.1 |
| succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase | SAMN05421827_10956 | Not Available | + | 2986125 - 2987519 | 50667.1 |
| nadph:quinone reductase | SAMN05421827_10957 | Not Available | + | 2987534 - 2988463 | 33324.5 |
| cation diffusion facilitator family transporter | SAMN05421827_10958 | Not Available | - | 2988635 - 2989576 | 34556.4 |
| l-glyceraldehyde 3-phosphate reductase | SAMN05421827_10959 | Not Available | - | 2989926 - 2990915 | 36850.3 |
| aldose 1-epimerase | SAMN05421827_10960 | Not Available | + | 2991287 - 2992459 | 42899.7 |
| haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed | SAMN05421827_10961 | Not Available | - | 2992533 - 2993198 | 24710.5 |
| undecaprenyl-diphosphatase | SAMN05421827_10962 | Not Available | - | 2993370 - 2994098 | 27963.3 |
| dna mismatch endonuclease, patch repair protein | SAMN05421827_10963 | Not Available | + | 2994457 - 2994960 | 19735.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
