Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05421827_10934 | Not Available | + | 2958148 - 2960952 | 107797.0 |
| hypothetical protein | SAMN05421827_10935 | Not Available | + | 2961065 - 2963137 | 75599.5 |
| hypothetical protein | SAMN05421827_10936 | Not Available | + | 2963161 - 2963997 | 30056.1 |
| hypothetical protein | SAMN05421827_10937 | Not Available | + | 2964067 - 2964987 | 35216.2 |
| atpase family associated with various cellular activities (aaa) | SAMN05421827_10938 | Not Available | + | 2964977 - 2966338 | 51916.4 |
| protein of unknown function | SAMN05421827_10939 | Not Available | + | 2966339 - 2967640 | 48512.1 |
| hypothetical protein | SAMN05421827_10940 | Not Available | - | 2967960 - 2968514 | 20432.4 |
| membrane fusion protein, multidrug efflux system | SAMN05421827_10941 | Not Available | + | 2969244 - 2970326 | 40178.3 |
| hydrophobic/amphiphilic exporter-1, hae1 family | SAMN05421827_10942 | Not Available | + | 2970351 - 2973521 | 115254.0 |
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN05421827_10943 | Not Available | + | 2973514 - 2974947 | 52813.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
