Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| conserved tm helix | SAMN05421827_108177 | Not Available | + | 2873142 - 2874035 | 33647.7 |
| nhap-type na+/h+ or k+/h+ antiporter | SAMN05421827_108178 | Not Available | + | 2874463 - 2875692 | 44813.2 |
| uncharacterized membrane protein | SAMN05421827_108179 | Not Available | - | 2875817 - 2877073 | 47582.5 |
| predicted purr-regulated permease perm | SAMN05421827_108180 | Not Available | - | 2877254 - 2878288 | 37612.5 |
| trehalose 6-phosphate synthase/phosphatase | SAMN05421827_108181 | Not Available | - | 2878359 - 2880584 | 83950.7 |
| monovalent cation:h+ antiporter, cpa1 family | SAMN05421827_108182 | Not Available | + | 2881104 - 2882339 | 44769.7 |
| hypothetical protein | SAMN05421827_108183 | Not Available | - | 2882187 - 2882483 | 11094.2 |
| l-lysine 6-transaminase | SAMN05421827_108184 | Not Available | + | 2882685 - 2884016 | 49992.0 |
| hypothetical protein | SAMN05421827_108185 | Not Available | + | 2884019 - 2884420 | 15238.5 |
| hypothetical protein | SAMN05421827_108186 | Not Available | + | 2884446 - 2885306 | 32809.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.