Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna pseudouridine1911/1915/1917 synthase | SAMN05421827_108157 | Not Available | - | 2850616 - 2851644 | 39138.8 |
| hypothetical protein | SAMN05421827_108158 | Not Available | + | 2851750 - 2852781 | 36560.1 |
| 1-aminocyclopropane-1-carboxylate deaminase | SAMN05421827_108159 | Not Available | + | 2852847 - 2853716 | 32181.9 |
| putative nadph-quinone reductase (modulator of drug activity b) | SAMN05421827_108160 | Not Available | + | 2854214 - 2854744 | 20681.9 |
| iron complex outermembrane recepter protein | SAMN05421827_108161 | Not Available | + | 2856311 - 2858743 | 91083.0 |
| protein of unknown function | SAMN05421827_108162 | Not Available | + | 2858772 - 2859479 | 25547.2 |
| protein of unknown function | SAMN05421827_108163 | Not Available | + | 2859604 - 2860077 | 17791.4 |
| protein of unknown function | SAMN05421827_108164 | Not Available | + | 2860106 - 2861023 | 33827.5 |
| peroxiredoxin | SAMN05421827_108165 | Not Available | + | 2861165 - 2861731 | 21048.4 |
| protein of unknown function | SAMN05421827_108166 | Not Available | + | 2861841 - 2862761 | 34236.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.