Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sec-c motif-containing protein | SAMN05421827_108147 | Not Available | - | 2840449 - 2840832 | 14791.6 |
| trna pseudouridine38-40 synthase | SAMN05421827_108148 | Not Available | + | 2840907 - 2841707 | 30962.5 |
| hypothetical protein | SAMN05421827_108149 | Not Available | + | 2841744 - 2842190 | 16432.6 |
| lipoprotein-releasing system permease protein | SAMN05421827_108150 | Not Available | - | 2842313 - 2843533 | 46228.4 |
| uncharacterized conserved protein ybbc, duf1343 family | SAMN05421827_108151 | Not Available | + | 2843709 - 2844977 | 46899.9 |
| hypothetical protein | SAMN05421827_108152 | Not Available | + | 2845116 - 2845322 | 7654.99 |
| hypothetical protein/two-component system, chemotaxis family, cheb/cher fusion protein | SAMN05421827_108153 | Not Available | - | 2845324 - 2847210 | 70716.8 |
| dna topoisomerase-1 | SAMN05421827_108154 | Not Available | - | 2847242 - 2848285 | 39532.8 |
| methionyl-trna formyltransferase | SAMN05421827_108155 | Not Available | + | 2848375 - 2849283 | 33482.7 |
| branched-chain amino acid aminotransferase | SAMN05421827_108156 | Not Available | - | 2849773 - 2850612 | 31603.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.