Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter terrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter terrae
Accession NumberFNCH00000000.1
Gene Summary
Adenine Count
1757318 bp
Thymine Count
1765928 bp
Guanine Count
1120783 bp
Cytosine Count
1109922 bp
Genome Length
5755101 bp
Protein-coding Genes
0 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function duf2625 | SAMN05421827_108137 | Not Available | + | 2832542 - 2833342 | 30274.1 |
| hypothetical protein | SAMN05421827_108138 | Not Available | - | 2833503 - 2833682 | 6552.1 |
| predicted dna-binding protein, mmcq/yjbr family | SAMN05421827_108139 | Not Available | - | 2834000 - 2834338 | 13075.8 |
| trna u34 5-methylaminomethyl-2-thiouridine-forming methyltransferase mnmc | SAMN05421827_108140 | Not Available | + | 2834639 - 2835313 | 24983.9 |
| predicted oxidoreductase | SAMN05421827_108141 | Not Available | + | 2835531 - 2836478 | 35173.4 |
| predicted purr-regulated permease perm | SAMN05421827_108142 | Not Available | + | 2836509 - 2837666 | 43170.9 |
| hypothetical protein | SAMN05421827_108143 | Not Available | + | 2837668 - 2837964 | 10911.9 |
| uncharacterized membrane protein | SAMN05421827_108144 | Not Available | + | 2837978 - 2838427 | 16877.5 |
| xtp/ditp diphosphohydrolase | SAMN05421827_108145 | Not Available | + | 2838448 - 2839254 | 30756.4 |
| hypothetical protein | SAMN05421827_108146 | Not Available | + | 2839330 - 2840454 | 43315.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.